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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_006360Putative transmembrane protein 56-B-like. (270 aa)    
Predicted Functional Partners:
ENSSMAP00000001280
Leucine-rich repeats and guanylate kinase domain containing.
    
 
 0.700
SMAX5B_012936
Pyruvate carboxylase isoform 2.
    
 
 0.608
SMAX5B_020424
Putative coiled-coil domain-containing protein C16orf93-like isoform 2.
    
 
 0.591
SMAX5B_021577
Uncharacterized protein.
    
 
 0.568
SMAX5B_003894
Putative primary ciliary dyskinesia protein 1.
    
 
 0.557
SMAX5B_002713
Uncharacterized protein.
    
   0.548
SMAX5B_011990
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.548
SMAX5B_015745
Uncharacterized protein.
    
   0.548
SMAX5B_000798
Putative dihydropyrimidine dehydrogenase.
   
 
  0.517
ENSSMAP00000003664
annotation not available
   
 
 0.489
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.