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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_017324Putative paladin isoform 2. (940 aa)    
Predicted Functional Partners:
SMAX5B_006454
Poly [ADP-ribose] polymerase.
      
 0.525
SMAX5B_006679
DNA-directed RNA polymerase II polypeptide F isoform 2.
      
 0.487
SMAX5B_020550
Syntaxin 4; Belongs to the syntaxin family.
      
 0.487
SMAX5B_017413
Putative disintegrin and metalloproteinase with thrombospondin motifs 14.
      
 0.473
SMAX5B_020140
Zinc finger protein 729 isoform 2.
      
 0.472
SMAX5B_021477
Putative zinc finger protein 384-like.
      
 0.472
CHST8
Carbohydrate sulfotransferase.
      
 0.457
SMAX5B_009506
Carbohydrate sulfotransferase.
      
 0.457
LMWPTP
Low molecular weight protein tyrosine phosphatase isoform 5.
      
 0.454
SMAX5B_019576
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
      
 0.453
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.