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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_020331WD repeat domain phosphoinositide-interacting protein 3. (357 aa)    
Predicted Functional Partners:
ATG2B
Putative autophagy-related protein 2-like B.
    
 
 0.739
SMAX5B_009280
Putative autophagy-related protein 2-like A-like.
    
 
 0.739
SMAX5B_017256
Putative bifunctional coenzyme A synthase isoform 2.
      
 0.612
ENSSMAP00000023213
ATG7 autophagy related 7 homolog (S. cerevisiae).
    
 
 0.609
SMAX5B_017287
Beclin-1.
    
 
 0.602
SMAX5B_006133
WD repeat domain phosphoinositide-interacting protein 2.
   
0.588
WIPI1
Putative WD repeat domain phosphoinositide-interacting protein 1.
   
0.588
ENSSMAP00000023491
WD repeat domain, phosphoinositide interacting 1.
   
0.588
SMAX5B_021793
Putative tectonin beta-propeller repeat-containing protein 2.
   
  
 0.540
ENSSMAP00000004411
annotation not available
   
  
 0.540
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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