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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_011006Putative T-box-containing protein TBX6L-like. (457 aa)    
Predicted Functional Partners:
SMAX5B_019665
Putative mesogenin-1.
   
 0.726
SMAX5B_019518
Putative transcription factor GATA-5.
   
 0.645
SMAX5B_019616
Putative transcription factor GATA-4.
   
 0.645
SMAX5B_006501
Putative transcription factor GATA-6.
   
 0.645
SMAX5B_014345
Putative GATA-binding factor 2-like.
   
 0.620
GATA2
Putative endothelial transcription factor GATA-2.
   
 0.601
SMAX5B_010563
Putative trans-acting T-cell-specific transcription factor GATA-3.
   
 0.601
SMAX5B_014283
GATA-binding protein 2a.
   
 0.601
SMAX5B_015647
Putative zinc finger transcription factor Trps1.
   
 0.575
ENSSMAP00000023493
Zinc finger GATA like protein 1.
   
 0.575
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.