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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_021645Putative GTP-binding protein 8 isoform 2. (295 aa)    
Predicted Functional Partners:
SMAX5B_022557
Putative tRNA modification GTPase GTPBP3 mitochondrial; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
   
 
 0.969
SMAX5B_018017
Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
  
 
 0.965
SMAX5B_012019
Putative mitochondrial assembly of ribosomal large subunit protein 1.
   
 
 0.954
SMAX5B_021280
Putative 39S ribosomal protein L21 mitochondrial.
  
   0.947
SMAX5B_004526
Putative rRNA methyltransferase 3 mitochondrial.
  
 
 0.944
SMAX5B_011704
39S ribosomal protein L13 mitochondrial; Belongs to the universal ribosomal protein uL13 family.
  
   0.939
ENSSMAP00000010889
Mitochondrial ribosomal protein L17.
  
 
 0.939
ENSSMAP00000007039
Mitochondrial ribosomal protein L24.
  
   0.935
SMAX5B_015620
Putative 39S ribosomal protein L3 mitochondrial; Belongs to the universal ribosomal protein uL3 family.
  
   0.934
SMAX5B_004640
Putative 39S ribosomal protein L15 mitochondrial.
  
   0.934
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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