STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000003364annotation not available (75 aa)    
Predicted Functional Partners:
SRF
MADS-box domain-containing protein.
    
 0.656
SRF-2
Serum response factor protein.
    
 0.656
SMAX5B_009142
Putative synaptojanin-2-binding protein.
    
 0.640
SMAX5B_018067
LIM domain-binding protein 1.
    
 0.573
SMAX5B_002061
Putative LIM domain-binding protein 1 isoform 2.
    
 0.573
SMAX5B_019095
Isoform 3 of LIM domain-binding protein 2.
    
 0.573
CACNA1H
Putative voltage-dependent T-type calcium channel subunit alpha-1H.
    
 0.555
SMAX5B_020458
Voltage-dependent T-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. This channel gives rise to T-type calcium currents. T-type calcium channels belong to the "low-voltage activated (LVA)" group and are strongly blocked by nickel and mibefradil. A particularity of this type of channels is an opening at quite ne [...]
    
 0.555
SMAX5B_020410
Putative voltage-dependent T-type calcium channel subunit alpha-1H-like.
    
 0.555
SMAX5B_020832
Putative voltage-dependent T-type calcium channel subunit alpha-1H-like.
    
 0.555
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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