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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_003921Putative trafficking kinesin-binding protein 2. (873 aa)    
Predicted Functional Partners:
SMAX5B_002715
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
    
 0.887
SMAX5B_020073
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
    
 0.875
SMAX5B_008324
Actin-related protein 10; Belongs to the actin family.
     
 0.848
SMAX5B_019042
Putative gamma-aminobutyric acid receptor subunit pi-like; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
    
  0.841
SMAX5B_008544
Putative gamma-aminobutyric acid receptor subunit pi-like; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
    
  0.841
SMAX5B_003758
Dehydrogenase/reductase SDR family member 4.
   
 
  0.813
SMAX5B_020984
Mitochondrial Rho GTPase.
    
 0.807
SMAX5B_007302
Putative mitochondrial Rho GTPase 1.
    
 0.807
SMAX5B_015153
Putative tetratricopeptide repeat protein 18.
    
 0.807
SMAX5B_006658
Dynactin subunit 5.
    
  0.802
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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