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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_000669Putative serpin H1-like; Belongs to the serpin family. (448 aa)    
Predicted Functional Partners:
ENSSMAP00000008308
Peptidylprolyl isomerase B (cyclophilin B).
  
 0.687
ENSSMAP00000033178
annotation not available
    
  0.684
SMAX5B_013726
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 0.660
ENSSMAP00000015106
annotation not available
    
 0.624
ENSSMAP00000018394
Collagen, type XXVII, alpha 1b.
    
 0.624
ENSSMAP00000033616
annotation not available
    
 0.624
ENSSMAP00000033619
annotation not available
    
 0.624
ENSSMAP00000021462
Collagen, type VI, alpha 1.
   
 0.622
ENSSMAP00000033511
annotation not available
    
 0.619
ENSSMAP00000033518
annotation not available
    
 0.619
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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