STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_011630Putative NSFL1 cofactor p47. (374 aa)    
Predicted Functional Partners:
SMAX5B_017587
Putative UBX domain-containing protein 6.
    
 0.993
ENSSMAP00000003318
YOD1 deubiquitinase.
   
 
 0.989
SMAX5B_004405
Putative phospholipase A-2-activating protein.
    
 
 0.989
SMAX5B_005888
Putative UBX domain-containing protein 7.
    
 
 0.985
SMAX5B_007542
Putative transitional endoplasmic reticulum ATPase-like; Belongs to the AAA ATPase family.
   
 0.985
SMAX5B_001998
Putative tether containing UBX domain for GLUT4.
    
 0.985
SMAX5B_010967
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
   
 0.985
SMAX5B_008155
Putative UBX domain-containing protein 2A.
  
 
 
0.983
SMAX5B_011776
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
    
 
 0.979
SMAX5B_022539
Putative FAS-associated factor 1.
    
 0.978
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.