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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000003446WD and tetratricopeptide repeats 1. (670 aa)    
Predicted Functional Partners:
SMAX5B_005614
CPSF_A domain-containing protein.
    
 0.989
SMAX5B_005669
Cullin-4B; Belongs to the cullin family.
    
 0.877
SMAX5B_009442
Putative cullin-4B; Belongs to the cullin family.
    
 0.877
KMO
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid.
     
 0.843
SMAX5B_021644
COP9 signalosome complex subunit 8.
    
 0.820
SMAX5B_011858
Malate dehydrogenase.
   
 
  0.820
SMAX5B_017043
COP9 signalosome complex subunit 4.
    
 0.817
COPS6
COP9 signalosome complex subunit 6 isoform 2.
    
 0.805
SMAX5B_001548
COP9 signalosome complex subunit 5.
    
 0.794
SMAX5B_001624
Uncharacterized protein.
    
 0.767
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.