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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000003480annotation not available (73 aa)    
Predicted Functional Partners:
SMAX5B_017819
Putative N-lysine methyltransferase SETD6.
    
 0.873
SMAX5B_008649
Putative NAD-dependent protein deacetylase sirtuin-1.
    
 0.860
SMAX5B_000679
40S ribosomal protein S3 isoform 2; Belongs to the universal ribosomal protein uS3 family.
    
 0.848
SMAX5B_019439
Putative ankyrin repeat domain-containing protein 6.
   
 0.811
SMAX5B_008336
I kappa B alpha isoform 2.
   
 0.811
SMAX5B_017229
Uncharacterized protein.
   
0.811
SMAX5B_012171
Putative B-cell lymphoma 3 protein.
   
 0.811
SMAX5B_021142
NF-kappaB 2.
   
 0.811
ENSSMAP00000014455
annotation not available
   
 0.811
SMAX5B_003479
Inhibitor kappa B alpha.
   
 0.811
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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