STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_012857Putative endoplasmic reticulum-Golgi intermediate compartment protein 3. (389 aa)    
Predicted Functional Partners:
SMAX5B_022557
Putative tRNA modification GTPase GTPBP3 mitochondrial; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
 0.984
ERGIC2
Putative endoplasmic reticulum-Golgi intermediate compartment protein 2-like.
   
 
0.952
SMAX5B_010575
Putative endoplasmic reticulum-Golgi intermediate compartment protein 2-like.
   
 
0.951
SMAX5B_003112
Vacuolar protein sorting-associated protein 45.
 
      0.900
SMAX5B_005429
Putative mitochondrial tRNA-specific 2-thiouridylase 1.
  
 0.894
ENSSMAP00000010760
Signal peptidase complex subunit 1.
    
   0.710
SMAX5B_021192
Putative ERO1-like protein beta.
    
   0.709
ENSSMAP00000008521
Coatomer protein complex, subunit epsilon.
   
 
 0.647
SMAX5B_003753
Putative mitochondrial inner membrane protein OXA1L isoform 3.
  
  
 0.645
SMAX5B_017462
Ornithine aminotransferase mitochondrial-like; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.628
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.