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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_007930Serine--pyruvate aminotransferase. (391 aa)    
Predicted Functional Partners:
SMAX5B_013905
Putative alanine--glyoxylate aminotransferase 2 mitochondrial-like; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.960
SMAX5B_001152
Putative hydroxyacid oxidase 2-like.
  
 0.948
SMAX5B_001389
Putative hydroxyacid oxidase 1.
  
 0.948
SMAX5B_002747
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 
 0.932
SMAX5B_013436
Putative phosphoserine phosphatase isoform 2.
   
 0.930
SMAX5B_006414
Putative alanine aminotransferase 2-like.
  
 0.927
GPT
Alanine aminotransferase 2-like.
  
 0.927
SMAX5B_007339
Putative glyoxylate reductase/hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.924
SMAX5B_008453
Putative peroxisomal sarcosine oxidase.
  
 
 0.924
SMAX5B_015344
Putative malate synthase glyoxysomal-like isoform 2.
  
 
 0.921
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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