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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_004851Putative glycerophosphodiester phosphodiesterase domain-containing protein 5-like. (578 aa)    
Predicted Functional Partners:
SMAX5B_022419
Phospholipase A2.
   
 
 0.851
SMAX5B_006949
Putative glycerol-3-phosphate dehydrogenase mitochondrial.
  
 0.835
SMAX5B_008959
Putative l-2-hydroxyglutarate dehydrogenase mitochondrial-like.
    
 0.761
SMAX5B_016089
Putative non--likeous end-joining factor 1-like.
    
 0.705
SMAX5B_002405
Uncharacterized protein.
    
 0.705
SMAX5B_008501
Putative cardiolipin synthase-like.
   
 0.688
ENSSMAP00000024415
annotation not available
   
 0.687
ENSSMAP00000026550
CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase).
   
 0.687
SMAX5B_002162
Putative cyclin-dependent kinase 15; Belongs to the protein kinase superfamily.
    
 0.677
SMAX5B_002150
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
    
 0.677
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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