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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_017933Putative methylcytosine dioxygenase TET1. (2171 aa)    
Predicted Functional Partners:
SMAX5B_016833
Putative AT-rich interactive domain-containing protein 4B isoform 2.
  
 
 0.752
SMAX5B_011587
Putative CXXC-type zinc finger protein 5-like.
     
0.747
SMAX5B_001062
Putative AT-rich interactive domain-containing protein 4A isoform 2.
   
 
 0.673
SMAX5B_004109
Putative CXXC-type zinc finger protein 5.
     
0.640
ENSSMAP00000028854
annotation not available
     
0.640
SMAX5B_006440
Putative segment polarity protein dishevelled-like DVL-3-like.
    
 0.593
SMAX5B_017203
Putative segment polarity protein dishevelled-like DVL-3-like.
    
 0.593
ENSSMAP00000008627
annotation not available
    
 0.593
SMAX5B_001492
Uncharacterized protein.
    
 0.593
SMAX5B_001009
Putative segment polarity protein dishevelled-like DVL-1.
    
 0.593
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.