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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_015934Putative dual specificity protein kinase CLK2-like. (604 aa)    
Predicted Functional Partners:
SMAX5B_005889
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
   
    0.581
YTHDC2
Putative ATP-dependent RNA helicase YTHDC2.
   
 
 0.559
SMAX5B_003383
Putative arginine/serine-rich protein 1 isoform 3.
   
   0.490
ENSSMAP00000009497
Serine and arginine rich splicing factor 2a.
    
 
 0.481
ENSSMAP00000024086
annotation not available
    
 
 0.481
SMAX5B_002594
Putative SRSF protein kinase 3-like; Belongs to the protein kinase superfamily.
    
 
0.479
SMAX5B_014292
Serine/arginine-rich protein specific kinase 1b.
    
 
0.479
SMAX5B_002885
Putative SRSF protein kinase 2.
    
 
0.479
ENSSMAP00000020994
SRSF protein kinase 3.
    
 
0.479
SMAX5B_014367
Serine/arginine-rich protein specific kinase 3-like.
    
 
0.479
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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