Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_015270Putative helix-loop-helix protein 2-like. (123 aa)    
Predicted Functional Partners:
SMAX5B_012595
Putative transcription factor 12.
    
 0.778
SMAX5B_006647
Putative transcription factor E2-alpha-like.
    
 0.778
SMAX5B_022501
Putative transcription factor E2-alpha-like isoform 3.
    
 0.778
SMAX5B_009804
Putative transcription factor 12-like.
    
 0.778
SMAX5B_003040
Putative transcription factor 4-like.
    
 0.778
TCF4
Putative transcription factor 4-like.
    
 0.778
SMAX5B_018542
Putative GA-binding protein alpha chain.
    
 0.743
SMAX5B_014098
DNA-binding protein inhibitor ID-1.
    
 0.701
SMAX5B_007633
Putative homeobox protein goosecoid-like.
    
 0.684
SMAX5B_001169
Putative ganglioside-induced differentiation-associated protein 2 isoform 2.
      
 0.672
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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