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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000003999annotation not available (1456 aa)    
Predicted Functional Partners:
SMAX5B_010132
Putative WAS protein family-like 1.
    
 
 0.931
SMAX5B_011731
WASH complex subunit strumpellin.
   
 
 0.894
SMAX5B_016719
Putative WASH complex subunit CCDC53 isoform 2.
    
 
 0.888
SMAX5B_012832
Putative WASH complex subunit 7.
   
 
 0.874
SMAX5B_003242
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.835
SMAX5B_011057
Putative ankyrin repeat domain-containing protein 32.
    
 
 0.829
SMAX5B_008973
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.803
SMAX5B_019700
Putative structural maintenance of chromosomes protein 6-like.
   
 
 0.659
SMAX5B_021661
Putative coiled-coil domain-containing protein 93.
    
 
 0.644
SMAX5B_007393
Non-structural maintenance of chromosomes element 1-like isoform 6.
    
 
 0.634
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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