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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_006147Putative N-acetylmuramoyl-L-alanine amidase. (472 aa)    
Predicted Functional Partners:
SMAX5B_007398
Peptidoglycan recognition protein isoform 3.
  
 
0.867
SMAX5B_008074
Putative phosphatidylinositol glycan anchor biosynthesis class U protein.
   
 
 0.764
SDS
Putative L-serine dehydratase/L-threonine deaminase.
   
 0.615
SMAX5B_003421
Putative L-serine dehydratase/L-threonine deaminase-like isoform 2.
   
 0.615
SMAX5B_008683
Putative threo-3-hydroxyaspartate ammonia-lyase-like.
   
 0.615
SMAX5B_005478
Putative serine racemase.
   
 0.615
SMAX5B_012171
Putative B-cell lymphoma 3 protein.
  
 0.597
ENSSMAP00000014455
annotation not available
  
 0.597
SMAX5B_019439
Putative ankyrin repeat domain-containing protein 6.
   
 0.584
SMAX5B_008336
I kappa B alpha isoform 2.
   
 0.584
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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