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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIB2Putative calcium and integrin-binding family member 2-like. (276 aa)    
Predicted Functional Partners:
TMC1
Transmembrane channel-like protein.
    
 0.898
ENSSMAP00000008656
Transmembrane channel-like 2b.
    
 0.897
SMAX5B_002418
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
    
 0.810
CASK
Peripheral plasma membrane protein CASK.
    
 0.810
SMAX5B_001718
Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.714
SMAX5B_018218
Putative myosin-IIIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.714
SMAX5B_015038
Putative ubiquitin-conjugating enzyme E2 variant 1-like isoform 2.
   
 
 0.687
SMAX5B_004819
Putative receptor-interacting serine/threonine-protein kinase 4.
    
  0.683
SMAX5B_006235
Uncharacterized protein.
     
 0.662
SMAX5B_000774
Putative peroxisomal NADH pyrophosphatase NUDT12.
    
  0.660
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.