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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_006057Putative E3 ubiquitin-protein ligase RNF126-like isoform 2. (312 aa)    
Predicted Functional Partners:
ENSSMAP00000026996
BCL2 associated athanogene 6.
   
 
 0.932
ENSSMAP00000013306
R-spondin 2.
   
 0.884
SMAX5B_002555
R-spondin-1.
   
 0.858
ENSSMAP00000008002
Ribosomal protein S27a.
    
 0.841
SMAX5B_020185
Golgi to ER traffic protein 4-like.
   
 
 0.792
SMAX5B_012183
Uncharacterized protein.
   
 0.778
SMAX5B_008071
Putative R-spondin-2-like.
   
 0.769
ENSSMAP00000014631
annotation not available
    
 0.746
ENSSMAP00000034351
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.746
RSPO3
Uncharacterized protein.
   
  0.733
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.