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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_004738Isocitrate dehydrogenase [NAD] subunit, mitochondrial. (367 aa)    
Predicted Functional Partners:
SMAX5B_014151
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
0.996
SMAX5B_014529
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
0.994
SMAX5B_014566
Putative isocitrate dehydrogenase.
  
0.992
ACO2
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.966
SMAX5B_020265
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.966
SMAX5B_014772
Citrate synthase; Belongs to the citrate synthase family.
  
 0.955
SMAX5B_017936
Putative 3-hydroxymethyl-3-methylglutaryl-CoA lyase cytoplasmic.
  
 0.949
SMAX5B_003424
Putative hydroxymethylglutaryl-CoA lyase mitochondrial.
  
 0.949
SMAX5B_011918
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 0.943
SMAX5B_003058
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.937
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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