Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_000135Putative RNA-binding protein 25-like. (812 aa)    
Predicted Functional Partners:
ENSSMAP00000015213
annotation not available
   
 0.994
SMAX5B_018555
Putative pre-mRNA-processing factor 40-like A-like.
   
 0.994
SMAX5B_020695
Putative luc7-like protein 3-like.
   
 0.986
SMAX5B_005576
RNA-binding protein 39.
   
 0.980
SMAX5B_014496
RNA binding motif protein 39b.
   
 0.980
ENSSMAP00000019168
Serine/arginine repetitive matrix 2.
   
 0.978
SMAX5B_004205
Putative ATP-dependent RNA helicase DDX46-like.
   
 0.969
SMAX5B_000428
Putative noncompact myelin-associated protein.
   
 0.966
SMAX5B_017134
Serine/threonine-protein kinase PRP4-like isoform 2.
   
  0.955
SART1
Putative U4/U6.U5 tri-snRNP-associated protein 1.
   
 
 0.950
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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