STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_017264Putative vesicular acetylcholine transporter. (523 aa)    
Predicted Functional Partners:
SLC18A1
MFS domain-containing protein.
  
  
 
0.741
RIMS2
Putative regulating synaptic membrane exocytosis protein 2.
     
 0.725
SMAX5B_003130
Putative regulating synaptic membrane exocytosis protein 2-like.
     
 0.725
SMAX5B_000040
Putative vesicular inhibitory amino acid transporter-like.
     
 0.724
SMAX5B_005233
Vesicular inhibitory amino acid transporter.
     
 0.724
SMAX5B_003262
Vesicular inhibitory amino acid transporter.
     
 0.724
VAMP3
Putative vesicle-associated membrane protein 2-like.
   
 
 0.720
CHAT
Choline O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family.
 
 
  
 0.718
SMAX5B_017925
Putative choline O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family.
 
 
  
 0.716
SMAX5B_010633
Putative synaptotagmin I.
     
 0.690
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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