STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_015278Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins. (153 aa)    
Predicted Functional Partners:
SMAX5B_003489
Putative pinin.
    
 0.997
SMAX5B_020962
Putative RNA-binding protein with serine-rich domain 1.
   
 0.991
SMAX5B_020170
RNA-binding protein with serine-rich domain 1.
   
 0.990
SMAX5B_016833
Putative AT-rich interactive domain-containing protein 4B isoform 2.
   
 
 0.989
SMAX5B_001062
Putative AT-rich interactive domain-containing protein 4A isoform 2.
   
 
 0.989
SMAX5B_003766
Putative apoptotic chromatin condensation inducer in the nucleus-like.
   
 0.986
SMAX5B_006078
Putative apoptotic chromatin condensation inducer in the nucleus.
   
 0.986
SMAX5B_016138
Uncharacterized protein.
     
 0.953
SMAX5B_013946
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.949
SMAX5B_001736
Pabpn1 protein isoform 2.
   
 0.947
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.