STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHATCholine O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family. (633 aa)    
Predicted Functional Partners:
SMAX5B_002786
Putative ribonuclease P protein subunit p14.
   
 0.899
ENSSMAP00000006071
Sterol carrier protein 2b.
   
 0.861
SMAX5B_006406
Putative non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.861
SMAX5B_008231
Putative glycerophosphocholine phosphodiesterase GPCPD1.
   
 
 0.853
SMAX5B_007971
Putative carnitine O-palmitoyltransferase 2 mitochondrial; Belongs to the carnitine/choline acetyltransferase family.
  
0.825
SMAX5B_015458
Putative choline kinase alpha-like.
 
 
 
  0.824
SMAX5B_011182
Putative phosphoethanolamine/phosphocholine phosphatase.
     
 0.822
SMAX5B_009730
Putative choline/ethanolamine kinase.
 
 
 
  0.821
SMAX5B_006874
Putative hydroxysteroid dehydrogenase-like protein 2.
   
 0.821
SMAX5B_017430
Putative phosphatase phospho1.
     
 0.819
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.