STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_011786Putative sister chromatid cohesion protein DCC1. (390 aa)    
Predicted Functional Partners:
SMAX5B_011391
AAA multi-domain protein.
   
 0.999
SMAX5B_015451
Uncharacterized protein.
   
 0.999
SMAX5B_006797
AAA domain-containing protein.
   
 0.992
SMAX5B_009608
Putative replication factor C subunit 4.
   
 0.978
SMAX5B_014823
Putative replication factor C subunit 2.
   
 0.973
SMAX5B_016147
Replication factor C subunit RFC5.
   
 0.969
SMAX5B_010917
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.962
POLE
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.962
SMAX5B_016376
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
 
 0.952
SMAX5B_001592
DNA polymerase.
   
 0.936
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.