STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_005775Putative pleckstrin-likey domain-containing family J member 1. (158 aa)    
Predicted Functional Partners:
SMAX5B_000328
Putative Fanconi anemia group M protein.
    
 0.969
SMAX5B_002315
Putative GDH/6PGL endoplasmic bifunctional protein.
   
 
 0.823
ENSSMAP00000000762
annotation not available
    
 0.779
SMAX5B_010116
Putative Fanconi anemia group F protein.
    
 0.733
ENSSMAP00000012260
annotation not available
    
 0.705
ENSSMAP00000025094
Nuclear transport factor 2.
    
 0.705
SMAX5B_009864
Putative replication protein A 70 kDa DNA-binding subunit.
    
 0.704
SMAX5B_020184
Putative meiosis-specific with OB domain-containing protein.
    
 0.704
RPA1
Replication protein A1.
    
 0.704
SMAX5B_019604
DIRP domain-containing protein.
    
 0.695
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.