close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_011679Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (295 aa)    
Predicted Functional Partners:
SDC3
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
   
0.919
SMAX5B_017932
Putative inactive heparanase-2-like.
     
 0.851
SMAX5B_015880
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
  
  
 
0.849
SMAX5B_006176
Putative tenascin-R.
     
 0.844
SMAX5B_006053
Putative tenascin-N.
     
 0.844
ENSSMAP00000018733
Zmp:0000000846.
     
 0.844
SMAX5B_022061
Putative tenascin-like.
     
 0.844
SMAX5B_003177
Putative tenascin-like.
     
 0.844
SMAX5B_012684
Putative fibronectin-like.
     
 0.829
SMAX5B_002418
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
    
 0.794
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.