STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_019854Putative capZ-interacting protein-like. (287 aa)    
Predicted Functional Partners:
SMAX5B_010132
Putative WAS protein family-like 1.
    
 
 0.851
SMAX5B_011731
WASH complex subunit strumpellin.
   
 
 0.825
SMAX5B_016719
Putative WASH complex subunit CCDC53 isoform 2.
    
 
 0.824
SMAX5B_012832
Putative WASH complex subunit 7.
   
 
 0.803
SMAX5B_011057
Putative ankyrin repeat domain-containing protein 32.
    
 
 0.709
SMAX5B_003242
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.692
SMAX5B_008973
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.683
SMAX5B_019700
Putative structural maintenance of chromosomes protein 6-like.
   
 
 0.601
SMAX5B_014933
Putative structural maintenance of chromosomes protein 5-like isoform 2.
   
 
 0.575
SMAX5B_017139
Putative DNA topoisomerase 2-binding protein 1.
    
 
 0.546
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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