STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_007935Putative bromodomain testis-specific protein-like. (946 aa)    
Predicted Functional Partners:
SMAX5B_009293
Transcription initiation factor TFIID subunit 7.
    
 
 0.776
SMAX5B_002726
Putative transcription factor E2F1.
    
 
 0.703
SMAX5B_022460
Putative E3 ubiquitin-protein ligase RNF220-like.
    
 
 0.696
ENSSMAP00000011182
Cyclin-dependent kinase 9 (CDC2-related kinase).
   
 
 0.679
SMAX5B_004096
Transcription initiation factor TFIID subunit.
    
 
 0.678
SMAX5B_010512
Putative histone-lysine N-methyltransferase NSD3-like.
   
 
 0.666
SMAX5B_010142
Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6.
    
 
 0.664
ENSSMAP00000017597
annotation not available
    
 
 0.648
ENSSMAP00000018522
annotation not available
    
 
 0.648
H4C3
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 
 0.648
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.