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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_020804Putative procollagen galactosyltransferase 1. (613 aa)    
Predicted Functional Partners:
SMAX5B_012746
Putative procollagen-lysine-2-oxoglutarate 5-dioxygenase 1.
   
0.882
SMAX5B_001635
Putative procollagen-lysine-2-oxoglutarate 5-dioxygenase 2.
   
0.882
SMAX5B_007048
Putative procollagen-lysine-2-oxoglutarate 5-dioxygenase 3-like.
   
0.882
SMAX5B_022267
Putative procollagen galactosyltransferase 2-like.
  
  
 
0.839
ENSSMAP00000003791
Si:ch211-114l13.7.
  
  
 
0.805
ENSSMAP00000033178
annotation not available
    
 0.675
URM1
Ubiquitin-related modifier 1; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically [...]
  
  
 
0.637
ENSSMAP00000016815
annotation not available
   
 0.613
ENSSMAP00000021267
Collagen, type VI, alpha 2.
   
 0.613
SMAX5B_011490
Putative TNFAIP3-interacting protein 2.
    
  0.515
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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