Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000004331LIM domain 7a. (1477 aa)    
Predicted Functional Partners:
SMAX5B_009059
Actn1.
   
 0.915
ACTN4
Actinin alpha 4.
   
 0.915
SMAX5B_012521
Putative LIM domain only protein 7-like.
     
 
0.900
SMAX5B_018182
Putative COMM domain-containing protein 6 isoform 2.
     
 0.803
ENSSMAP00000003883
Si:dkey-30c15.10.
    
   0.753
SMAX5B_011100
Putative actin-binding protein anillin isoform 2.
    
   0.753
SMAX5B_007662
Putative emerin.
    
 
 0.590
SMAX5B_004110
S-phase kinase-associated protein 1-like protein; Belongs to the SKP1 family.
     
 0.584
SMAX5B_006179
Calponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity.
    
 
 0.583
SMAX5B_020322
DCN1-like protein.
     
  0.572
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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