SMAX5B_022250 protein (Scophthalmus maximus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SMAX5B_022250

Putative prostaglandin E2 receptor EP3 subtype. (392 aa)

Predicted Functional Partners:

GNG4

0.925

SMAX5B_009137

0.925

SMAX5B_015801

0.900

SMAX5B_022359

0.900

SMAX5B_002601

0.900

SMAX5B_004111

0.900

SMAX5B_002255

0.900

SMAX5B_016471

0.898

SMAX5B_016552

0.898

GNB5

0.897

Your Current Organism:

Scophthalmus maximus

NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GNB5	GNG4	ENSSMAP00000012571	ENSSMAP00000017175	Putative guanine nucleotide-binding protein subunit beta-5-like isoform 2.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.904
GNB5	SMAX5B_002255	ENSSMAP00000012571	ENSSMAP00000026778	Putative guanine nucleotide-binding protein subunit beta-5-like isoform 2.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 isoform 2.	0.642
GNB5	SMAX5B_002601	ENSSMAP00000012571	ENSSMAP00000015914	Putative guanine nucleotide-binding protein subunit beta-5-like isoform 2.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.	0.642
GNB5	SMAX5B_004111	ENSSMAP00000012571	ENSSMAP00000024187	Putative guanine nucleotide-binding protein subunit beta-5-like isoform 2.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2.	0.634
GNB5	SMAX5B_009137	ENSSMAP00000012571	ENSSMAP00000020624	Putative guanine nucleotide-binding protein subunit beta-5-like isoform 2.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.904
GNB5	SMAX5B_016471	ENSSMAP00000012571	ENSSMAP00000030598	Putative guanine nucleotide-binding protein subunit beta-5-like isoform 2.	Putative guanine nucleotide-binding protein subunit alpha-14-like.	0.849
GNB5	SMAX5B_016552	ENSSMAP00000012571	ENSSMAP00000030611	Putative guanine nucleotide-binding protein subunit beta-5-like isoform 2.	Guanine nucleotide-binding protein G(Q) subunit alpha.	0.849
GNB5	SMAX5B_022250	ENSSMAP00000012571	ENSSMAP00000004334	Putative guanine nucleotide-binding protein subunit beta-5-like isoform 2.	Putative prostaglandin E2 receptor EP3 subtype.	0.897
GNB5	SMAX5B_022359	ENSSMAP00000012571	ENSSMAP00000004758	Putative guanine nucleotide-binding protein subunit beta-5-like isoform 2.	Putative guanine nucleotide-binding protein subunit beta-4.	0.634
GNG4	GNB5	ENSSMAP00000017175	ENSSMAP00000012571	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Putative guanine nucleotide-binding protein subunit beta-5-like isoform 2.	0.904
GNG4	SMAX5B_002255	ENSSMAP00000017175	ENSSMAP00000026778	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 isoform 2.	0.889
GNG4	SMAX5B_002601	ENSSMAP00000017175	ENSSMAP00000015914	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.	0.889
GNG4	SMAX5B_004111	ENSSMAP00000017175	ENSSMAP00000024187	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2.	0.889
GNG4	SMAX5B_016471	ENSSMAP00000017175	ENSSMAP00000030598	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Putative guanine nucleotide-binding protein subunit alpha-14-like.	0.851
GNG4	SMAX5B_016552	ENSSMAP00000017175	ENSSMAP00000030611	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Guanine nucleotide-binding protein G(Q) subunit alpha.	0.851
GNG4	SMAX5B_022250	ENSSMAP00000017175	ENSSMAP00000004334	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Putative prostaglandin E2 receptor EP3 subtype.	0.925
GNG4	SMAX5B_022359	ENSSMAP00000017175	ENSSMAP00000004758	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Putative guanine nucleotide-binding protein subunit beta-4.	0.889
SMAX5B_002255	GNB5	ENSSMAP00000026778	ENSSMAP00000012571	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 isoform 2.	Putative guanine nucleotide-binding protein subunit beta-5-like isoform 2.	0.642
SMAX5B_002255	GNG4	ENSSMAP00000026778	ENSSMAP00000017175	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 isoform 2.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.889
SMAX5B_002255	SMAX5B_009137	ENSSMAP00000026778	ENSSMAP00000020624	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 isoform 2.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.889