STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_004842Putative spectrin beta chain non-erythrocytic 4-like. (1532 aa)    
Predicted Functional Partners:
SMAX5B_002979
Spectrin alpha chain non-erythrocytic 1.
   
0.937
ENSSMAP00000004716
annotation not available
 
      0.839
SMAX5B_012637
Putative intersectin-2.
     
 0.665
SMAX5B_008282
Putative intersectin-2.
     
 0.665
SMAX5B_012398
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.661
SMAX5B_008644
Putative intersectin-1-like.
     
 0.623
ENSSMAP00000002370
annotation not available
     
 0.623
ENSSMAP00000008521
Coatomer protein complex, subunit epsilon.
    
  0.616
ENSSMAP00000027382
annotation not available
  
 0.577
SMAX5B_009895
Putative SH3 and multiple ankyrin repeat domains protein 3-like.
  
 
  0.535
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.