SMAX5B_017213 protein (Scophthalmus maximus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

SMAX5B_017213

Putative zinc finger E-box-binding homeobox 2. (1278 aa)

Predicted Functional Partners:

CTBP2

0.804

SMAX5B_008898

0.804

SMAX5B_009310

0.804

CTBP2-2

0.804

SMAX5B_008649

0.789

SMAX5B_006291

0.710

SMAX5B_020257

0.710

SMAX5B_005230

0.638

ENSSMAP00000001477

0.620

SMAX5B_022214

0.620

Your Current Organism:

Scophthalmus maximus

NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTBP2	ENSSMAP00000001477	ENSSMAP00000004991	ENSSMAP00000001477	Putative C-terminal-binding protein 2.	annotation not available	0.661
CTBP2	SMAX5B_006291	ENSSMAP00000004991	ENSSMAP00000010015	Putative C-terminal-binding protein 2.	Putative histone acetyltransferase p300-like isoform 2.	0.720
CTBP2	SMAX5B_017213	ENSSMAP00000004991	ENSSMAP00000004373	Putative C-terminal-binding protein 2.	Putative zinc finger E-box-binding homeobox 2.	0.804
CTBP2	SMAX5B_020257	ENSSMAP00000004991	ENSSMAP00000010755	Putative C-terminal-binding protein 2.	Putative histone acetyltransferase p300-like.	0.720
CTBP2	SMAX5B_022214	ENSSMAP00000004991	ENSSMAP00000001503	Putative C-terminal-binding protein 2.	Putative histone deacetylase 2-like.	0.928
CTBP2-2	ENSSMAP00000001477	ENSSMAP00000032376	ENSSMAP00000001477	Putative altered inheritance of mitochondria protein 3-like.	annotation not available	0.661
CTBP2-2	SMAX5B_006291	ENSSMAP00000032376	ENSSMAP00000010015	Putative altered inheritance of mitochondria protein 3-like.	Putative histone acetyltransferase p300-like isoform 2.	0.720
CTBP2-2	SMAX5B_017213	ENSSMAP00000032376	ENSSMAP00000004373	Putative altered inheritance of mitochondria protein 3-like.	Putative zinc finger E-box-binding homeobox 2.	0.804
CTBP2-2	SMAX5B_020257	ENSSMAP00000032376	ENSSMAP00000010755	Putative altered inheritance of mitochondria protein 3-like.	Putative histone acetyltransferase p300-like.	0.720
CTBP2-2	SMAX5B_022214	ENSSMAP00000032376	ENSSMAP00000001503	Putative altered inheritance of mitochondria protein 3-like.	Putative histone deacetylase 2-like.	0.928
ENSSMAP00000001477	CTBP2	ENSSMAP00000001477	ENSSMAP00000004991	annotation not available	Putative C-terminal-binding protein 2.	0.661
ENSSMAP00000001477	CTBP2-2	ENSSMAP00000001477	ENSSMAP00000032376	annotation not available	Putative altered inheritance of mitochondria protein 3-like.	0.661
ENSSMAP00000001477	SMAX5B_005230	ENSSMAP00000001477	ENSSMAP00000020900	annotation not available	Putative transcription factor Sp1.	0.807
ENSSMAP00000001477	SMAX5B_006291	ENSSMAP00000001477	ENSSMAP00000010015	annotation not available	Putative histone acetyltransferase p300-like isoform 2.	0.811
ENSSMAP00000001477	SMAX5B_008649	ENSSMAP00000001477	ENSSMAP00000020520	annotation not available	Putative NAD-dependent protein deacetylase sirtuin-1.	0.850
ENSSMAP00000001477	SMAX5B_008898	ENSSMAP00000001477	ENSSMAP00000006498	annotation not available	Ctbp1 wu:fi43a11; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.661
ENSSMAP00000001477	SMAX5B_009310	ENSSMAP00000001477	ENSSMAP00000016925	annotation not available	Putative C-terminal-binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.661
ENSSMAP00000001477	SMAX5B_017213	ENSSMAP00000001477	ENSSMAP00000004373	annotation not available	Putative zinc finger E-box-binding homeobox 2.	0.620
ENSSMAP00000001477	SMAX5B_020257	ENSSMAP00000001477	ENSSMAP00000010755	annotation not available	Putative histone acetyltransferase p300-like.	0.811
SMAX5B_005230	ENSSMAP00000001477	ENSSMAP00000020900	ENSSMAP00000001477	Putative transcription factor Sp1.	annotation not available	0.807