STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_014667Uncharacterized protein; Belongs to the LIMR family. (492 aa)    
Predicted Functional Partners:
SMAX5B_004684
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
 
   
 0.568
SMAX5B_016091
Hedgehog protein.
 
   
 0.566
SMAX5B_018625
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
 
   
 0.566
ENSSMAP00000004482
Desert hedgehog signaling molecule.
 
   
 0.558
SMAX5B_018830
Putative very low-density lipoprotein receptor-like.
    
  0.537
SMAX5B_005694
Putative low-density lipoprotein receptor-related protein 4-like.
    
  0.537
SMAX5B_018387
Putative low-density lipoprotein receptor-related protein 2.
    
  0.537
ENSSMAP00000022003
annotation not available
    
  0.537
SMAX5B_015120
Putative low-density lipoprotein receptor-related protein 2-like.
    
  0.537
ENSSMAP00000029955
annotation not available
    
  0.537
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.