STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_018380Ubiquitin carboxyl-terminal hydrolase. (232 aa)    
Predicted Functional Partners:
ENSSMAP00000008002
Ribosomal protein S27a.
    
 0.960
ENSSMAP00000000415
annotation not available
    
 0.947
ENSSMAP00000014581
annotation not available
    
 0.947
ENSSMAP00000014631
annotation not available
    
 0.927
ENSSMAP00000034351
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.927
SMAX5B_012701
26S proteasome non-ATPase regulatory subunit 14.
   
 0.887
ENSSMAP00000009288
annotation not available
   
 0.845
ENSSMAP00000023908
NEDD8 ubiquitin like modifier, like.
   
 0.845
ENSSMAP00000011103
annotation not available
    
 0.837
ENSSMAP00000001057
Guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b.
    
 0.810
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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