Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
DDX39ADExD-box helicase 39A. (427 aa)    
Predicted Functional Partners:
SMAX5B_021048
THO complex subunit 4.
   
 0.987
SMAX5B_004022
Putative THO complex subunit 2 isoform 2.
   
 0.976
SMAX5B_013946
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.972
SMAX5B_014623
Putative SAP domain-containing ribonucleoprotein.
   
 0.972
SMAX5B_016519
THO complex subunit 3.
    
 0.969
SMAX5B_005939
Putative THO complex subunit 1.
   
 0.969
SMAX5B_014042
Putative THO complex subunit 7-like isoform 2.
   
 0.967
NCBP1
Nuclear cap-binding protein subunit 1.
   
 0.965
SMAX5B_001909
Putative THO complex subunit 4-like.
   
 0.965
ENSSMAP00000034455
Eukaryotic translation initiation factor 4A3.
   
 0.965
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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