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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX39ADExD-box helicase 39A. (427 aa)    
Predicted Functional Partners:
SMAX5B_021048
THO complex subunit 4.
   
 0.989
SMAX5B_001909
Putative THO complex subunit 4-like.
   
 0.987
SMAX5B_004022
Putative THO complex subunit 2 isoform 2.
   
 0.982
SMAX5B_014623
Putative SAP domain-containing ribonucleoprotein.
   
 0.978
ENSSMAP00000034455
Eukaryotic translation initiation factor 4A3.
  
0.973
SMAX5B_013946
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.969
SMAX5B_010932
Putative THO complex subunit 5-like.
   
 0.968
SMAX5B_005939
Putative THO complex subunit 1.
   
 0.968
SMAX5B_014042
Putative THO complex subunit 7-like isoform 2.
   
 0.963
SMAX5B_006029
Putative polymerase delta-interacting protein 3.
   
 0.962
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.