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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_004723Putative CCAAT/enhancer-binding protein gamma. (164 aa)    
Predicted Functional Partners:
SMAX5B_011517
Putative cyclic AMP-dependent transcription factor ATF-4-like.
   
 0.953
SMAX5B_006288
Cyclic-AMP response element-binding protein 2.
   
 0.950
SMAX5B_005135
DNA damage-inducible transcript 3.
   
 0.847
SMAX5B_004177
Putative pleckstrin-likey-like domain family B member 1 isoform 2.
   
 0.829
SMAX5B_008432
BZIP domain-containing protein.
   
 0.829
SMAX5B_010821
Cytochrome c oxidase subunit VIIc.
   
 0.794
SMAX5B_013167
Putative cytochrome c oxidase subunit 5A mitochondrial-like isoform 2.
   
 0.783
COX5A
Cytochrome c oxidase subunit 5A.
   
 0.783
SMAX5B_000052
DUF4706 domain-containing protein.
   
 0.773
COX5B
Cytochrome c oxidase subunit 5B mitochondrial.
   
 0.773
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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