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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_018570Putative PTB domain-containing engulfment adapter protein 1-like. (366 aa)    
Predicted Functional Partners:
SMAX5B_012637
Putative intersectin-2.
    
  0.981
SMAX5B_008282
Putative intersectin-2.
    
  0.981
APP
Amyloid beta A4 protein.
    
 
 0.827
SMAX5B_018690
Putative amyloid beta A4 protein-like.
    
 
 0.827
SMAX5B_001081
Uncharacterized protein.
    
 
0.792
SMAX5B_021272
Putative DCC-interacting protein 13-beta.
    
 
 0.792
SMAX5B_002612
Caspase 9; Belongs to the peptidase C14A family.
     
 0.705
SMAX5B_014046
Uncharacterized protein.
    
 0.692
SMAX5B_014637
Uncharacterized protein.
    
 0.692
SMAX5B_018225
Putative low-density lipoprotein receptor-related protein 1B.
    
 0.692
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.