Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SMAX5B_008862ADP-ribosylation factor-like 3 like 1; Belongs to the small GTPase superfamily. Arf family. (198 aa)    
Predicted Functional Partners:
SMAX5B_000958
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes. Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location. Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E. Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide [...]
   
 0.895
SMAX5B_013435
GMP_PDE_delta domain-containing protein.
    
 0.847
UNC119
GMP_PDE_delta domain-containing protein.
    
 0.847
SMAX5B_001081
Uncharacterized protein.
    
 0.844
SMAX5B_021272
Putative DCC-interacting protein 13-beta.
    
 0.844
SMAX5B_017479
Putative tubulin-specific chaperone C.
    
 0.835
SMAX5B_007875
Protein XRP2; Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization.
    
 0.835
SMAX5B_021370
Putative cilia-and flagella-associated protein 36.
   
 
 0.811
SMAX5B_014962
Mitochondrial 28S ribosomal protein S25.
   
   0.694
SMAX5B_019671
Putative 39S ribosomal protein L19 mitochondrial.
   
   0.693
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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