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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_008862ADP-ribosylation factor-like 3 like 1; Belongs to the small GTPase superfamily. Arf family. (198 aa)    
Predicted Functional Partners:
SMAX5B_000958
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes. Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location. Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E. Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide [...]
   
 0.905
SMAX5B_012637
Putative intersectin-2.
    
 0.898
SMAX5B_008282
Putative intersectin-2.
    
 0.898
SMAX5B_017479
Putative tubulin-specific chaperone C.
    
 0.897
SMAX5B_007875
Protein XRP2; Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization.
    
 0.897
SMAX5B_013435
GMP_PDE_delta domain-containing protein.
    
 0.895
UNC119
GMP_PDE_delta domain-containing protein.
    
 0.895
SMAX5B_021370
Putative cilia-and flagella-associated protein 36.
   
 
 0.883
SMAX5B_007298
Uncharacterized protein.
   
 0.849
SMAX5B_008644
Putative intersectin-1-like.
    
 0.843
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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