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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_022434Putative 39S ribosomal protein L47 mitochondrial. (271 aa)    
Predicted Functional Partners:
ENSSMAP00000010889
Mitochondrial ribosomal protein L17.
   
 
 0.999
SMAX5B_010013
Putative 39S ribosomal protein L23 mitochondrial isoform 2.
   
 
 0.999
SMAX5B_010678
Putative 39S ribosomal protein L22 mitochondrial isoform 2; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.998
SMAX5B_019671
Putative 39S ribosomal protein L19 mitochondrial.
   
 
 0.998
SMAX5B_018417
39S ribosomal protein L30 mitochondrial isoform 2.
   
   0.998
SMAX5B_021280
Putative 39S ribosomal protein L21 mitochondrial.
   
 
 0.998
SMAX5B_002294
Putative 39S ribosomal protein L20 mitochondrial; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.997
SMAX5B_011704
39S ribosomal protein L13 mitochondrial; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.997
SMAX5B_002878
Putative 28S ribosomal protein S35 mitochondrial isoform 4.
   
 
 0.997
SMAX5B_013174
Putative 39S ribosomal protein L46 mitochondrial.
   
 
 0.997
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.