Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SMAX5B_011336Putative transmembrane anterior posterior transformation protein 1-like. (572 aa)    
Predicted Functional Partners:
SMAX5B_006527
Putative SUN domain-containing ossification factor-like.
    
 
 0.811
SMAX5B_017654
Putative SUN domain-containing ossification factor.
    
 
 0.811
SMAX5B_011236
Cleavage stimulation factor subunit 1.
 
      0.664
SMAX5B_010602
40S ribosomal protein S16 isoform 2; Belongs to the universal ribosomal protein uS9 family.
    
   0.654
SMAX5B_021621
Putative HAUS augmin-like complex subunit 3.
      
 0.619
SMAX5B_007729
Putative zinc finger CCHC-type and RNA-binding motif-containing protein 1 isoform 2.
      
 0.619
SMAX5B_018858
RIC3 domain-containing protein.
    
   0.591
SMAX5B_022060
Topoisomerase (DNA) III beta-like.
   
  
 0.564
SMAX5B_010766
Putative TBCC domain-containing protein 1.
      
 0.562
SMAX5B_005963
Putative major facilitator superfamily domain-containing protein 6-like.
      
 0.550
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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