STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_000533Putative TBC1 domain family member 25. (852 aa)    
Predicted Functional Partners:
SMAX5B_013048
Microtubule-associated protein 1 light chain 3 alpha.
   
 0.840
SMAX5B_006930
Putative ras-related protein Rab-33B-like.
     
 0.839
ENSSMAP00000000888
GABA(A) receptor-associated protein like 2.
   
 0.828
ENSSMAP00000007038
annotation not available
   
 0.828
SMAX5B_001494
GABA(A) receptor associated protein.
   
 0.828
ENSSMAP00000022446
RAB33A, member RAS oncogene family.
     
 0.776
SMAX5B_018993
RAB9B member RAS oncogene family-like.
   
 0.724
SMAX5B_011156
Putative armadillo repeat-containing protein 5.
   
 0.724
SMAX5B_022046
Putative ras-related protein Rab-9A-like.
   
 0.724
RAB9A
Ras-related protein Rab-9A isoform 2.
   
 0.724
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.