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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_010888Putative piwi-like protein 1 isoform 2; Belongs to the argonaute family. (852 aa)    
Predicted Functional Partners:
SMAX5B_008237
Putative tudor domain-containing protein 6-like.
   
 0.936
SMAX5B_017393
Putative tudor domain-containing protein 1 isoform 2.
   
 0.931
SMAX5B_008990
Putative tudor domain-containing protein 6-like.
   
 0.914
SMAX5B_016702
Putative tudor and KH domain-containing protein isoform 4.
   
 0.902
SMAX5B_000180
Putative tudor domain-containing protein 15-like.
   
 0.892
SMAX5B_000485
Putative kinesin-like protein KIF15; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.874
SMAX5B_001113
Putative RING finger protein 17.
   
 0.855
SMAX5B_022473
Putative axonemal dynein light chain domain-containing protein 1.
   
 0.838
SMAX5B_007822
Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.
   
 0.820
SMAX5B_012910
Putative tudor domain-containing protein 7B-like.
   
 0.810
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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