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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_001925Armadillo repeat-containing protein 4. (641 aa)    
Predicted Functional Partners:
SMAX5B_002078
Putative coiled-coil domain-containing protein 151.
    
 
 0.886
SMAX5B_011153
Putative tetratricopeptide repeat protein 25.
  
 
 0.857
SMAX5B_011137
Putative tetratricopeptide repeat protein 25 isoform 2.
  
 
 0.844
SMAX5B_017866
Putative EF-hand calcium-binding domain-containing protein 1.
  
 
 0.837
SMAX5B_015943
Putative EF-hand calcium-binding domain-containing protein 1.
  
 
 0.834
SMAX5B_000277
Putative parkin coregulated protein.
   
 
 0.823
ENSSMAP00000002996
annotation not available
   
 
 0.818
SMAX5B_002371
Putative coiled-coil domain-containing protein 114-like.
   
 
 0.818
SMAX5B_015638
Putative tektin-2.
   
 
 0.799
SMAX5B_004761
Putative EF-hand domain-containing family member C2.
   
 
 0.783
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.