STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_000708Putative GRAM domain-containing protein 1B. (992 aa)    
Predicted Functional Partners:
SMAX5B_004153
Putative myelin protein zero-like protein 2.
    
 0.661
SMAX5B_010202
Putative sodium channel subunit beta-2-like.
    
 0.661
SMAX5B_001858
Putative GRAM domain-containing protein 1C.
  
 
  
0.615
SMAX5B_004085
Putative sodium channel subunit beta-4-like.
   
 0.599
SMAX5B_010184
Putative sodium channel subunit beta-4-like.
   
 0.599
ENSSMAP00000018672
annotation not available
    
  
0.591
GRAMD2B
Putative GRAM domain-containing protein 3 isoform 2.
    
  
0.591
SMAX5B_018289
Putative trafficking protein particle complex subunit 10.
    
 
 0.533
SMAX5B_003656
Putative GRAM domain-containing protein 1A-like.
  
 
  
0.531
SMAX5B_003675
Putative sodium channel subunit beta-1-like.
 
   
  0.519
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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