STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_020404Putative transcription factor 20-like. (979 aa)    
Predicted Functional Partners:
SMAX5B_016962
Ash2-like.
    
 0.840
SMAX5B_002807
Retinoblastoma-binding protein 5.
    
 0.826
ENSSMAP00000019358
Embryonic ectoderm development.
   
 0.783
ENSSMAP00000012270
annotation not available
    
 0.741
ENSSMAP00000012297
annotation not available
    
 0.741
SMAX5B_022376
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
   
 0.716
SMAX5B_020643
Putative histone-lysine N-methyltransferase PRDM9-like.
   
 0.676
ENSSMAP00000019975
annotation not available
   
 0.676
SMAX5B_007887
Zinc finger protein.
   
 0.676
SMAX5B_005503
Putative PR domain zinc finger protein 4-like.
   
 0.676
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.