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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_001762Putative WW domain-containing adapter protein with coiled-coil-like. (542 aa)    
Predicted Functional Partners:
SMAX5B_012522
Putative RNA polymerase-associated protein LEO1-like.
   
 
 0.981
SMAX5B_013018
Putative U1 small nuclear ribonucleoprotein 70 kDa.
    
 
 0.919
SMAX5B_008733
Putative cell division cycle 5-like protein.
   
 
 0.907
SMAX5B_010561
Putative splicing factor 3B subunit 2.
   
 
 0.885
SMAX5B_000135
Putative RNA-binding protein 25-like.
   
 
 0.884
SMAX5B_009131
Putative RNA-binding protein 25-like.
   
 
 0.884
SMAX5B_003961
Splicing factor 3B subunit 3.
    
 
 0.880
SMAX5B_008867
E3 ubiquitin protein ligase.
   
 0.869
SMAX5B_020316
E3 ubiquitin protein ligase.
   
 0.869
SART1
Putative U4/U6.U5 tri-snRNP-associated protein 1.
   
   0.857
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.